LOCUS BG073033 610 bp mRNA linear EST 12-MAY-2010 DEFINITION H3117H03-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3117H03 3', mRNA sequence. ACCESSION BG073033 VERSION BG073033.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 610) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG073033.1. Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3117 row: H column: 03 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..610 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3117H03-3" /db_xref="taxon:10090" /clone="H3117H03" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 163 a 136 c 159 g 152 t ORIGIN 1 aaagatttat ttattattat atctaagtac actgtagctg tcttcaggtg caccagaaga 61 gggcatcaga tctcattatg gatggttgtg agctaccatg tggttgctgg gatttgaact 121 caggaccttc agaagagcag tcagtgctct taaccactga gccatctctc cagcctccca 181 cttatacttt taatgtcatt gttttttgag ataagagctc accctgtagc ccaggctaac 241 ctcaaggcct cagtggaatt ataaatatgt gtcaccattc ccgacttccc accttcattt 301 tctgggtccc actgttactc cgtggaggac cctgccaagg tagcttcagg gctgtatgca 361 ggaggtagca aaagggatgg agagaggcca gcaattcgga gatctccagg gagaacaggt 421 tggaccagga ggatggtaat gggagagaaa gagttgatgt gatcttagtg gtccccagga 481 gccagggcag ggtctgtgag cacagccagg agactctccc aagcacatcg agactgtgga 541 tgggacaagg acacatgatg tttgaaagcc tagaaaactg ggctatctga accctgacca 601 ctgtaacaat //