LOCUS BG072982 716 bp mRNA linear EST 12-MAY-2010 DEFINITION H3117C05-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3117C05 3', mRNA sequence. ACCESSION BG072982 VERSION BG072982.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 716) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG072982.1. Other_ESTs: H3117C05-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3117 row: C column: 05 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..716 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3117C05-3" /db_xref="taxon:10090" /clone="H3117C05" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 194 a 179 c 141 g 202 t ORIGIN 1 atgctgttgt tttggcttta ttttggtttt ggggtttttc aagacagggt ttctctgtgt 61 agcccccaat gtcctggaac ttactctgta caccaggctg tctttagact cagagatctg 121 cctgcttctg ccttccaagg ttcccatgtt tttatgaaat acactttacc aacagtgcta 181 tcttgccaga tctccctagc ttgcttgctt gctttcttcc ttcctttctt ttttggacac 241 tggctttttc ctacagccta ggctgacctt gaactcaact gtgtagccta agtacttcca 301 acccttctgc ctcaaaagtc tcctgagtaa gtaggattac aggcttaaat acacattttt 361 tgagctctat cttagcaaaa gtgaaatcaa actttacgac cagcaaccat atcttagtga 421 gtcctcaaga cattctgcag catcttgaat tccgagactc acatcttcat acttcactcc 481 actcaacact ggcaaagtca gaatgaagtc aggccaggga cagagtaggg gttctaaggg 541 aagtgacaga caaagggctt tccccaacag acccacgggg gactacgatt aagatacagt 601 atgtagagag gaatagagac caggaagccc aagatagaaa gccctaacct caccagctac 661 atctacattt agaccaacag agctaacctt aagcagagaa aatggagccc agcagc //