LOCUS BG072849 762 bp mRNA linear EST 12-MAY-2010 DEFINITION H3115F08-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3115F08 3', mRNA sequence. ACCESSION BG072849 VERSION BG072849.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 762) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG072849.1. Other_ESTs: H3115F08-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3115 row: F column: 08 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..762 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3115F08-3" /db_xref="taxon:10090" /clone="H3115F08" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 249 a 130 c 140 g 243 t ORIGIN 1 ctttctttct ttctttcttt ctttctttct ttcttccctt gtctattttt tacagctaac 61 cctcaattta agaagtacag aggagtacca tttcagcaat gcaaaaacct tctaaaatat 121 gataaatatt tgacaatata gtctttacat atttaatcac actgttgaaa accttaaaat 181 atagggaata atactattaa atatgggaat ttgaaatgta cctcattttc tatattagcc 241 ccatagagga atactttgca gtttcaagat gaaatttatt tagcttaaat gtattcatca 301 ttgtaatatg tttacatgag atatgctgga tttacaatct agttacgcta tcaatatttg 361 ctgatagaat aggcagagag attataggtt ttctgtgtgg gctttctcct ttgatttaga 421 taagtaggca taaatcttga tatattttcc agacagcatt gagcaaatca tctgttctac 481 accaaatggg ttgctggtaa ttaaagaagg gaaagtattg gatgcaagtt ctactaataa 541 gccagccacc atagtggaaa cccacgggca aagacagagt aaggagtgct gccaagttca 601 cattaggtaa accagggagc ctgctaaaac accccctagt gctgggaaat tcattaccaa 661 aatgtagtaa tcatcttgca gaagtaccag cagattgcac acattacctc ctgcagactg 721 gagtgggaat aagtaaaagg aaagaggtaa tgatggtcga gg //