LOCUS BG072812 607 bp mRNA linear EST 12-MAY-2010 DEFINITION H3115C06-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3115C06 3', mRNA sequence. ACCESSION BG072812 VERSION BG072812.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 607) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG072812.1. Other_ESTs: H3115C06-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3115 row: C column: 06 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..607 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3115C06-3" /db_xref="taxon:10090" /clone="H3115C06" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 228 a 101 c 108 g 170 t ORIGIN 1 ccaagaaaat aaatttattg aactttgaag ggaaaaatcc acagacataa agaaagttaa 61 atatagactg cagaacacaa ctagttaaac ggtgaataac ggcttgtgtg gccagcaaag 121 taccaaaaaa tgacattctg gaactgattg aggtatttag ctatttttgg ctatagaaac 181 gtggtcagcc tatggtgaaa tggtaagata gttcatcaaa acacacatct ttaagctgaa 241 tagattctaa gttgatgata cttcatatga actaaatcat gtagccattg gagaaaccat 301 agcagcaaag tagcagaaaa acttattaaa atccattaca aagtaacaag gcgaacctta 361 aacacccaag gctagatttt cactgtctct cctgcatgaa agagatttca aaatcactaa 421 acattaagct tgtttcccca caaaggtctt ggcaaaatgg taaataccat taaaacttaa 481 aggtaatttt aaagtttcag gcatctaaaa aatatttaaa tgagatgtat tcttcagtca 541 gctgagagtc ctctttctcc cataaatttt ttttgggggg ggtgctaacc aaagaactat 601 gtttatg //