LOCUS BG072799 735 bp mRNA linear EST 12-MAY-2010 DEFINITION H3115B04-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3115B04 3', mRNA sequence. ACCESSION BG072799 VERSION BG072799.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 735) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG072799.1. Other_ESTs: H3115B04-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3115 row: B column: 04 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..735 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3115B04-3" /db_xref="taxon:10090" /clone="H3115B04" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 230 a 137 c 136 g 232 t ORIGIN 1 ccaggaaaat aatgcttgat aatgttttta tttagataaa atgacaaaat aatagaaaag 61 ttataggaac cgtacatgga gcttctatac ttcttttgac ttgaattaga taaagttcct 121 ccatttgccc caggtgtgta cacaggcgac acaagtgagt gcgatcatac atcatatgct 181 catgagagat gcatatagtt ccttcacacc gcttgggtta gaactaagga ctgcctaaat 241 gctagacaag tgctttgtca ctaagctcta tctccatctc taaaagacgg tggggaatta 301 attctattta ctgtgcaagc atctgaatca gattattact aatgtagcaa ctacctaact 361 gcacagctta agaggatgac atcctgtttt gtgctttcta attgtctgtg attcctatta 421 gttcccctgt attaaatttt agttccagaa agagagggta tttacctctt tactgtcttc 481 atagattttc attgaacttc acatcattgt gacatcataa atagaccttc gcaaggcctg 541 tgatactctc caacatcagt gcgactgttt aatgagcctt taaacagcct ttaaagaaat 601 ccactggaat agtttagtcg tatcccttgg aaaaactaga gctaggtaat gatgactgct 661 tggagactaa tggaggtaga aaaggacttt taaactaaag ttcttttcaa atatacacat 721 agaaagtcag cgtgt //