LOCUS BG072793 678 bp mRNA linear EST 12-MAY-2010 DEFINITION H3115A08-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3115A08 3', mRNA sequence. ACCESSION BG072793 VERSION BG072793.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 678) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG072793.1. Other_ESTs: H3115A08-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3115 row: A column: 08 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..678 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3115A08-3" /db_xref="taxon:10090" /clone="H3115A08" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 195 a 151 c 174 g 158 t ORIGIN 1 gggagaacaa agggtttatt ggactcaaca gggggacatt caggatacat gtgggaacat 61 tgcaggaccc cagatactta tgtgtggatg gtgatagcat aataccttgg aattctgcct 121 cttcactgtg ctggctgtgt gcctccaggg tcatgagcag caatccacaa caaaatgaca 181 ttctaggaag tacagacttg aaagccctag agaggattag agcacctacc tacccagcag 241 gggctataaa ggcaaaacat ggtatttcac acactactcc caccttggag cttctataac 301 tcataattca tcactagagg gctccaggaa gaattgttgc acatgaggat aaaaggacaa 361 gggtggaggt cattgggagg accatcagag caaggtctgc aggaggactg agctcaggct 421 gaacagaagc acccctgcca tggtccaggt gctgcctcca ttgggaactg ctacattgca 481 gaggtcttcc tggcaacaga agtcttcacg ttgaccttag tacccaggat ctccatactt 541 tcaatattag gagggcagat gggtaagcaa agattgttct ttactttcct tgtttgagaa 601 tccacaataa ctgctgcctc ctgagtaaca cagactccat cagggtaggg gcaggtaatt 661 gatgggcaag aagtctca //