LOCUS BG072747 721 bp mRNA linear EST 12-MAY-2010 DEFINITION H3114E03-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3114E03 3', mRNA sequence. ACCESSION BG072747 VERSION BG072747.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 721) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG072747.1. Other_ESTs: H3114E03-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3114 row: E column: 03 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..721 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3114E03-3" /db_xref="taxon:10090" /clone="H3114E03" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 257 a 121 c 140 g 203 t ORIGIN 1 aagaaagaat aaaatgtagc aatatataaa agtaagtaca gcaattatac ataagtaatg 61 caaacatgat atacagacat gagtaactgt aaagcaagtg tgaaatatga ataaagttaa 121 ttattgtcag catttatgaa tgagtgctag gagatacttt aaggtgtgag caggtgtctt 181 cgtgtaggaa ccagtggcca cagacttctt ttcatatatt ttctctttct gctttgccta 241 cttttcctta tttgagcagg ttaggcaggc cgatctgtgg ctgccacact cacgtacagt 301 gatggtgaca cagccctgtc acatcaatgc tgtaagaaca acaccaaatt caatggcaaa 361 aatcaagtgt tgtaatggat tcatccaaaa tctttttctc actgacaaag ctggaacacc 421 tcccttaact gaaaagggtg taagctaatt tctcttctta aatgaatgaa tctaccacag 481 agagaaaaaa aaacaaaaaa ccaaaaaaac aaaacaaaac aaaacaaaac ctcgataagc 541 atttgttggg aatagaaatg aattcttaaa gccatgaatt tcttacttgg atccatacac 601 caagaagtct gcagatggtt tatggagact ctgtaaatgt gagattttat ccaaacattt 661 tgagtttgta tggattttgt ggggaggagt tccacagtgt ttatcagatg agtaacgggg 721 c //