LOCUS BG072735 749 bp mRNA linear EST 12-MAY-2010 DEFINITION H3114D03-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3114D03 3', mRNA sequence. ACCESSION BG072735 VERSION BG072735.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 749) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG072735.1. Other_ESTs: H3114D03-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3114 row: D column: 03 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..749 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3114D03-3" /db_xref="taxon:10090" /clone="H3114D03" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 246 a 161 c 136 g 206 t ORIGIN 1 cacaggataa gattatattt tattagagat cttatattac atattcccaa aaagttataa 61 aaatcttcca agagaaaaat atcaaaacct gttgatttca atgagcagaa taatcacaat 121 gaaagtaaac attttcttct agacaaagga ctgtgaaaac acttcagcac gagtacagca 181 aagacacggg atgataatta caatgtcttc taacatcata cagcattttc ttaaatcaat 241 tttttttttt tagaatgctg atatttgaac catgcacctc taaacaaaat taaaatttca 301 gagagtgggg agagagtagc gagacagtct tggtccactg agcatctgtg ataacagatg 361 taccaagcct aactaaacag accgcccccc ccctcccccg ctgtcaggtc tgaagtgtgg 421 ctgactgccc acgtgtgcca gagaaaccag tttctgacca taacccaaag caaaagacac 481 cctctcttca tttccccagt gttgtaatgt gaaaataact ttaaaaagca gaagcttgct 541 ggttacatag agtttctgct tcacctgtga ataaggagct ggtggccaga acacagagtg 601 ggtcccctgt gtctgctgtt tttgtttatt atttatgtca gccactggtt tcatttggcc 661 tcatcagaac ttctgtagtg attaagcata gccacttaac cacagagcac agtgaacatc 721 cacaggaagg catacactta agatacaac //