LOCUS BG072537 617 bp mRNA linear EST 12-MAY-2010 DEFINITION H3112A03-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3112A03 3', mRNA sequence. ACCESSION BG072537 VERSION BG072537.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 617) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG072537.1. Other_ESTs: H3112A03-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3112 row: A column: 03 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..617 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3112A03-3" /db_xref="taxon:10090" /clone="H3112A03" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 212 a 92 c 98 g 215 t ORIGIN 1 ctaaagcaat tcttacttta ctatagaaac aatctgatta ttcattattc tcattgggga 61 agccataggg taaattgctg ttcaactgtt tgtatttcat atgtggtttt cttgaaacaa 121 atattgaatt ttgggaaatt caacaggtat atcgatactt gctttttata gtaaatacaa 181 atacatacag gtgggacatt caaattcttt gtgtgtcctg gcagagtgcc aggcctgtgt 241 tgaacattca taaataatgt tcaaatcaat gtcttcctaa ctgttgaggg caagggtttt 301 agacaaaata acaagtgtta gttcaaagtc taatgccact taaatgtcaa gtctaatatt 361 taactataaa atgattaaat agtaatttta attatgatga aatgatacac acttcttatt 421 aaagtggttc tttagttgaa ttgtcttgtt atttgcttta ttggattcct atcccataaa 481 aaccctctaa ttgcagacat ataaaagctc atgatcatct gctataaaca tccaggagtt 541 cttttgcaat taaagaaaat tgaattacag ataccaataa accatgctaa gtcgaaatga 601 tgcatgaaag caattaa //