LOCUS BG072497 730 bp mRNA linear EST 12-MAY-2010 DEFINITION H3111C10-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3111C10 3', mRNA sequence. ACCESSION BG072497 VERSION BG072497.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 730) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG072497.1. Other_ESTs: H3111C10-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3111 row: C column: 10 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..730 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3111C10-3" /db_xref="taxon:10090" /clone="H3111C10" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 182 a 195 c 121 g 232 t ORIGIN 1 cctttttctt ttgtcgttga gattttctac ttttatttta tgagtatggc tattctgcct 61 gcatgtatct gtgaagcact ttcacgcctg gagcccacag aggatggtac tggatctatt 121 gggactagag tgagaggtag ctgggagttg ccacatcagt actgaatttg aatccagctc 181 ttctgtaata actgccagtg ctctaactgc tgaaccatct ccccagcccc ttcttacctt 241 attcttttaa agtactcaga atctcgactt agggaaggaa ggaaggcact gtagagaata 301 catgtgaatc tttgattatg aactggctgg ttctcactac ttctcgctgt gggcccttac 361 aaacagccat gttaaaatcc caagctatct cacactatag attgttttct atgctatagc 421 cacctatacc tattcttcct tcttcaacat tgctgtccca atccttgaca atttcaatac 481 ccaactggat actggggctt tgagctccct ctggtgtgaa aataaaagtt cctagcaact 541 ttgctcttag aatttttcct gttcttccac ctcatttaat tctccccctg ccaatactca 601 atgcaagcca gtcacacaag cattaccttg cacacctccc aactctcttt cacctacaca 661 atgacaagta ctcttgcttc ccagtagccg ttcctctaca caaagcaaag caactcacct 721 gaacctttct //