LOCUS BG072427 836 bp mRNA linear EST 12-MAY-2010 DEFINITION H3110D06-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3110D06 3', mRNA sequence. ACCESSION BG072427 VERSION BG072427.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 836) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG072427.1. Other_ESTs: H3110D06-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3110 row: D column: 06 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..836 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3110D06-3" /db_xref="taxon:10090" /clone="H3110D06" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 222 a 192 c 181 g 241 t ORIGIN 1 aaaatatttc tcagacatag acttttgagc ctaggacagg caggacagct gagttccaga 61 cttctgagac tcaccatatc ctcactttta gcttcttctg ggattatttt tctagctgta 121 ctctgcagtc cctagagcaa acagcacctg ccttaggtct cccactgaac cagtactttg 181 tttttataat gtcctgggtt tcactagtgg attaagtgaa aaaagatgat tagtgccaga 241 tttctatttt cagtggccca tgggctatag ccattagcaa cttggtcctt gtggccccta 301 gtcatcttaa agcaatactc cactcctcaa ttctccttgg gcaaatgagc agatttcaca 361 gggcagagtt tttctcctgg gctccttatt ttcactccaa gtgtgcacag gcaccatggc 421 cagaattaga gaaggcatgt gttctacaat aagactccaa gagtaagggt tttgtcttct 481 tttgcaatta cgtgacatac atttgtgtat gggtatgagg atatgaatgc agatatgagt 541 gcccacagag accagaggca tcaggcatcc ctagacctgg agttgcaagt ggttgtaagt 601 tgcctgatat agggctggga actaaattca ggtcctataa aagcagtatg tactcctaag 661 caccaagcaa tctctttagt ctctgtcttc ttttgactgt acgtaaaagc ctaagacagg 721 taacagatca aggaaaggct gctatggttg agcaaacatc cagagaccct caaacacagg 781 actttccgac tttagcttac ccaggccgct cgctgctcct gctacttgag tggaca //