LOCUS BG072404 830 bp mRNA linear EST 12-MAY-2010 DEFINITION H3110B06-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3110B06 3', mRNA sequence. ACCESSION BG072404 VERSION BG072404.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 830) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG072404.1. Other_ESTs: H3110B06-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3110 row: B column: 06 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..830 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3110B06-3" /db_xref="taxon:10090" /clone="H3110B06" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 262 a 147 c 175 g 246 t ORIGIN 1 cagttttaag aatactttat tttttgagat tacatagtca ttattgctga tctaatacaa 61 tcacttagac atagagattt ccaagagctt ctcagaactg gtgatcctta gaggctttgt 121 tcctttcagt aaaatgacag taagaactag atgattattt gtatagatat ggatgtgttt 181 tacatatata agtatatata tgtttagact tatcaatgtc aatatataat ttgctggtgt 241 tacctatttt ctttccataa ttttccttta ttaaaaaagc ttaatgcaac aatgcattct 301 gatttatttt aaaccatgac aaaagttaat tctgaggaaa agcacaggag cagcaatttc 361 agatcttttc agagaaaagc caagcagcag aaaaagcttt gcaggagtgt gtggccgtgg 421 ggagcctggc tctcccagga ggggaacatg aggagggagg agggcagagg gaaggtagat 481 tagaggcatt tttgtttaac aagaaaaaga aaacaatatt tccactaaaa cagcaagaag 541 accttgaagt agcacaaatt cattgtagac aagtggtgta tttccctctg cccagggcca 601 cataaccaga gacaaccagt cttctcttcc ttgtctccag gtagctagag tgcttgtaaa 661 aggaagagtt ggaataagaa gaaatttgct cttattccaa ggttagagga aacaatgatt 721 tggttccagc attagggcag aacctgggct atctgctttc ttcccaactc tccacaagcc 781 tgctgtactg ggattcattc gccccagggc ctggcacatg ctaatcaagt //