LOCUS BG072403 747 bp mRNA linear EST 12-MAY-2010 DEFINITION H3110B05-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3110B05 3', mRNA sequence. ACCESSION BG072403 VERSION BG072403.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 747) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG072403.1. Other_ESTs: H3110B05-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3110 row: B column: 05 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..747 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3110B05-3" /db_xref="taxon:10090" /clone="H3110B05" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 266 a 145 c 115 g 221 t ORIGIN 1 acagcagaga cttgacatgt aagcccatgt tgtcattttg ccttagcttc ccaagcactg 61 gattaaaaac tgtcttatca aaccatcatt taccattgat aggaaacaga tttgttatac 121 aaatccaaat tgaggtaata tggaactcat aacctgagaa gcaaatatat ttcaaaacaa 181 tattttcctt aataatttgt ttagtttccc atctgcttgg gtggaagggt actgaaaagt 241 atttgcccta aggaaataat tttaaactaa aatcttcctt gagaaaaaca caacattata 301 gaaaacacaa tatacaatga acagaaaaca atatgataga taatgagtta gatattcacc 361 cctcagtttt ggcccactaa taaagttcta aaatattctg atttttacta tataacatgt 421 attctgctgg aaatcaaacc catagttgta tacatgctag gccaaactat attcctagtt 481 ccttgttata tatttaaaaa agcatctata taaaatggca aatgttgtca attatacttt 541 gggccctaat cttaacataa gccaggaaag aaacaaatga aaatgtaaaa tgtgccttta 601 atcctagcat ttgggaagca gaggccagtc tggtctacag tgaattccag ggcagccaag 661 cctacataca gccttgtctc aactcctgcc ccacgcacat cccaaaagta aatgtgtctt 721 cattacgctg gattcaatac cagcatg //