LOCUS BG072397 822 bp mRNA linear EST 12-MAY-2010 DEFINITION H3110A11-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3110A11 3', mRNA sequence. ACCESSION BG072397 VERSION BG072397.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 822) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG072397.1. Other_ESTs: H3110A11-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3110 row: A column: 11 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..822 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3110A11-3" /db_xref="taxon:10090" /clone="H3110A11" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 247 a 206 c 167 g 202 t ORIGIN 1 gctttttgag acagggtttc tctgtgtagt cctggctgtc ctggaattca ctttgtagac 61 caggctggcc tcgaactcag aaatccacct gcctctgcct cccaagtact gggattaaag 121 gcgagctcca ccacgcccag ccatatacaa atttcttgga taagaagggg tttcaagtaa 181 aaaaagttta agaagtcatg aaccaggagg ctggaggaat accctggtcg ttaggagcac 241 tggctgctct tccagaggcc ctagatttga ttcctagcac ccacatggaa gcttataact 301 ttaactacaa ttccaggaat ctgacaccct cttctggcct ttgcaggcac cagggacaca 361 tgatatacag acatacaaac aagtaaaaca ctctccacac acgaacttaa aaacaaacaa 421 acaaaatctt tttaaaaagt catgaatcag agtgttccct tttgggagta accccaaaga 481 tccctttctt gaaatctgac aacttaaggc tggaaagatg gcagagacag gcaggcctct 541 ggggcacact gaccgcctgc ttaggtatat ctatgaatct atgagttcca ggttcagtga 601 cagactctgt ctcaagaaaa ttaggttgag agtaatcaag gaagacacct aatgtcatgt 661 acccacatag acaaataaaa cacggtgtgc ctaaactccc cactgaaaaa cttgccaccc 721 tgaataggag tctcaacttc ctcaggccat cagacttcct cagactgcca gttttttgta 781 gagaccctct gactagcact tccacactca gttatttgtg gc //