LOCUS BG072298 567 bp mRNA linear EST 12-MAY-2010 DEFINITION H3109A03-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3109A03 3', mRNA sequence. ACCESSION BG072298 VERSION BG072298.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 567) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG072298.1. Other_ESTs: H3109A03-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3109 row: A column: 03 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..567 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3109A03-3" /db_xref="taxon:10090" /clone="H3109A03" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 151 a 144 c 130 g 142 t ORIGIN 1 gttttgtttt tcgagacagg gtttctctgt gtagccctgg ctgtcctgga actcactctg 61 tagaccaggc tggtctcgaa ctcagaaatc cgcctgcctc tgcctcccaa gtgctgggat 121 taaaggcagg caccaccact gcccagcgcc ttttgatttt gaaacgaggt ctcagtacat 181 aaccctcact ggccctgaac tcttaacgtg acctcaaggc tcccaagtgc tccaattaac 241 agggaactca ctgccattct tgtaggaaat ggcatatgcc tttaaggcag aaataagaag 301 tggaaaacta actatactat tcacatagta gagcaaggga tttgcattta tattttcttt 361 ctttaacaaa acaacactgc atgccaggaa cattcacgta accgcctgcg gccacactaa 421 ctgggttcct aagtgggagg ccggagctgt atggaagcaa acggcgagag aaataatgga 481 ggccaagaca tgtttctgtt caaggccccc aagtttacta agagtctgtg cttataaagg 541 ggggtggccc atcccctgcc aatccat //