LOCUS BG072260 704 bp mRNA linear EST 12-MAY-2010 DEFINITION H3108E09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3108E09 3', mRNA sequence. ACCESSION BG072260 VERSION BG072260.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 704) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG072260.1. Other_ESTs: H3108E09-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3108 row: E column: 09 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..704 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3108E09-3" /db_xref="taxon:10090" /clone="H3108E09" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 184 a 176 c 148 g 196 t ORIGIN 1 ccaaagtaat caagatttaa tgaatggcat cagtagaaca agctgaccag tttttcaacc 61 ctggaaagtg ggtagaaagc atagacccgg tacttcagta ggagcaacac cacacattat 121 caagttacga aggtgaggaa acatcttcat gtgtccaaca ctttccggac actgaggacc 181 acagaccgca cacagactac atagaagcct cttcactttc tgctagtctc ttgagtatta 241 aacccaggtc ccctttggcc acttgcaggg gtgtcttttc ttctttattc tcaatgtaaa 301 tacttgctcc ttgagtcacc agaaattttg cctcttccac tctctcttca tcacaggcta 361 agtgtagagg agtgttaccc tcagtgtctt ggatgtttgt ggatgctttg tagaacagaa 421 ggatgtgaac catcttcaag ttacccttgg ctgctgcccg gtgcattgct gtagcatcgt 481 aatggtcctt cgcatctggg ttagccccac cttctagtaa cataacagca atctcatgcc 541 tattcttcga agctgcataa tggagtggag tgcagccgtt ttgattgaca gcattcacat 601 gtgcaccttt caccagaagg gcttttacaa tctcatcccg gccagcgagg cagcaatatg 661 aagaggagac aacctgcgtc atctttatca ttcactggca ctca //