LOCUS BG072207 658 bp mRNA linear EST 12-MAY-2010 DEFINITION H3108A02-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3108A02 3', mRNA sequence. ACCESSION BG072207 VERSION BG072207.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 658) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG072207.1. Other_ESTs: H3108A02-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3108 row: A column: 02 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..658 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3108A02-3" /db_xref="taxon:10090" /clone="H3108A02" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 177 a 134 c 140 g 207 t ORIGIN 1 ggtgagctca tgggtttatt gggatcactt cagaaacatg ggggtattta caggagcagg 61 ggcttccaca cacacatgta tgtccacctg tatacataca catgtccatc tccacataac 121 attatttcct atttatttta ttgcaagcta ctttatagtg ccatatttcc cacaacccaa 181 gatcccgtag cttaagaaaa cttgctatta tgatcactgt atgtgtgtga tctgtgtgtg 241 atctgtgtgt gtatgagtgg ttttagatgg aactctgtgt gctgcttgtt aggaaagcat 301 ggtacacagc tgtgtccttt gctggctgag ctcccctggg agtgtctggg agaggacact 361 ctatttatat ttcaaaagca tggaacattt aaaaaagaaa aaattttttt gtatcaatgt 421 aaatacttca tcctgctgcc agaccggaca ctgccattat gtgctatttc aaggcaggga 481 gcaaagaaca ctggagcaag cctttaactg caagtattcc ctaagctatc acggcttctg 541 ggatcagtac ctgtcttggg aatgaagttc cttccctgac ttgtttagcc ctccagaaag 601 cacactttgt acacaagtct ttaatagagc agtgtgtatt ttcataaagg aatacttt //