LOCUS BG072189 623 bp mRNA linear EST 12-MAY-2010 DEFINITION H3107G07-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3107G07 3', mRNA sequence. ACCESSION BG072189 VERSION BG072189.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 623) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG072189.1. Other_ESTs: H3107G07-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3107 row: G column: 07 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..623 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3107G07-3" /db_xref="taxon:10090" /clone="H3107G07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 198 a 133 c 124 g 168 t ORIGIN 1 aggggatggg agacacacaa gatcatgaac agaaagagaa agaagcccac tgatttttgt 61 ttggttttct tttcatcagg atcacaaggc cagacaaagt cgggggacag ctcccacaca 121 cggagcccag aagtcttcag tgtggcacca gattcagggt cacagtcaca tttgaaagag 181 catgcttcct ctcacccgga gagctttatg cctgtttttg cttttgcatt aactatggac 241 acagagtgct aactagctta aataaaaaat gcctcctagt ctcttagagc tacaaatttc 301 taattaaaaa cagggttaat ttacctagca gataaaagtt acacagatag gaatgagcca 361 tgacctctct ccctgtagga aatggccata attttctggt agcacagttc attgaaggct 421 gatagaaatg accccaaagg cactggaaat agtatcttgc ccagtggaaa agccataccc 481 taaattttgg gtggaaatct aatcttctaa actcttctag aacctaggaa attcctagcc 541 aacaattcat cctctgattc aatttcttta ttcccagttt ctattccatg aaaaatgtaa 601 gtactggggg gaaaaatcac att //