LOCUS BG072136 628 bp mRNA linear EST 12-MAY-2010 DEFINITION H3107B08-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3107B08 3', mRNA sequence. ACCESSION BG072136 VERSION BG072136.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 628) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG072136.1. Other_ESTs: H3107B08-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3107 row: B column: 08 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..628 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3107B08-3" /db_xref="taxon:10090" /clone="H3107B08" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 211 a 129 c 107 g 181 t ORIGIN 1 ccaaatccaa attacaacac tttattgcag catcggcaaa ggtcagattt ctgaagctgg 61 tgaagattgg gcagcatttc catgtgaaat gttacaactt tacaagtttt gtttcttatt 121 gaaatctaca tgcagaaact gaaacatggt aaaagaaaga tgcaaaatag aaaaaagatg 181 tgatcaagtt gtagcataca gatgtgttct ttaactaaat cactatgcct actggaaagc 241 aaatgaaaga cacctatcct aataaattaa cagactgtca gaaacagact aagaaccctc 301 atttctagtg gggaaagggg aacaaaacga aacgaaaaca aaagcaaagt aaaagctcta 361 cttgtttcca tatcttgttt agacacagag gctgtaaacc catgaaggtc aacaaaatac 421 tctgatccgc ttcttgctgt ccttcgttct tctgtgacat gctcactggc accgtttgtt 481 ttcaatgata cttacaatgg gctcaactat atccccgttc ttaggctggt atcagacctt 541 ctaaaccatc tgcattaatg ctttgcatat taacagtctt cacagtttct ttcactctaa 601 taggcaactt tacatcactg actctgat //