LOCUS BG071987 665 bp mRNA linear EST 12-MAY-2010 DEFINITION H3105D10-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3105D10 3', mRNA sequence. ACCESSION BG071987 VERSION BG071987.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 665) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG071987.1. Other_ESTs: H3105D10-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3105 row: D column: 10 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..665 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3105D10-3" /db_xref="taxon:10090" /clone="H3105D10" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 202 a 154 c 126 g 183 t ORIGIN 1 aaaagaaaaa caaaaaacaa aaaaatttat ttgggaattg acaagggacg ccctcacaca 61 cgtacaaaca caacaaaagt gctctagttc cctctagaaa atttggtccc cgaaagacat 121 tactcaacca ccaggtcacg ggatttcggg ccagccggct ggggccacaa gcccgtgtgg 181 gccggccatg acgagtttca catttctcct tccgaagtgg aagaaacaag acattggaaa 241 aacaaaaatc agggatagga gtgtcatctg ggcggtgtgt accagccagg cagagatctc 301 ttctggcatc cggggcagaa tcggaagatc cggggaaatt tgttttgagt tcaactttta 361 aatagaaaag aaattcctaa tttgtagtgg aaaccttatt ttagctagtt attttctcct 421 ccctctgaac acagcctaat gaagtcacca cgggaattct tacacaaatt tcccagcagg 481 gtcgatgaag aaaaccaaaa cttttgattt tgttgtttgg ttttagcaaa ctccaaggcc 541 attacatttc tcctccccac ccccccatga atgttttatt ctctccctct ttcttttttt 601 ctttaaaaag tattttttaa tattttcaaa agcctcacca atctttttca taaagacctg 661 gcctg //