LOCUS BG071986 673 bp mRNA linear EST 12-MAY-2010 DEFINITION H3105D09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3105D09 3', mRNA sequence. ACCESSION BG071986 VERSION BG071986.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 673) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG071986.1. Other_ESTs: H3105D09-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3105 row: D column: 09 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..673 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3105D09-3" /db_xref="taxon:10090" /clone="H3105D09" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 140 a 187 c 171 g 175 t ORIGIN 1 gttttttcaa aaattgtgta tacaaagtca ggagctagat aatgtagctg gaaaagatac 61 ctcagctctg ctccaggtcc atcaccaagt agggatgtat ttccttcaag gcctggagga 121 gggagtcctt gcaggtcagg ttccaggatg gaacaaagct gaagagcttc ctcatcttgt 181 cttggctggt ggtctctgca cgaactgcct ggtactgtcc ttcagtcagc acactgccat 241 gcaaagcatc cagcactccg tccacttctg tgaccctggc aatgagtgct tgcctgtgct 301 ggtccacaaa gtgtcctgtt ctggctgtac tctgagcagg gacactggct gcagctgcca 361 cagctccaga ctcttcttta gtcgtttgca gctgctcagc cagctcctgt aagcccatgt 421 ctctaagcac agtcattgtg agctccaagc catacgactc cagatagtag ctgacaagtt 481 tgtcagtgag atctatggcg tccatctgca gcagggcccc gcgtgggatg cgcccacagc 541 cttctcgcag ttgcactgtc agcagcttca tcttgaactt tttgagttca tcccctgaca 601 agttttcaag agcgtccagg atggcatctc gtgcccgccc catggctctg gggtgggcag 661 cgcggtcacc ttt //