LOCUS BG071976 681 bp mRNA linear EST 12-MAY-2010 DEFINITION H3105C10-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3105C10 3', mRNA sequence. ACCESSION BG071976 VERSION BG071976.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 681) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG071976.1. Other_ESTs: H3105C10-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3105 row: C column: 10 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..681 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3105C10-3" /db_xref="taxon:10090" /clone="H3105C10" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 189 a 199 c 141 g 152 t ORIGIN 1 ctatgttaac tgcttaattt atttagtctg cttcatggcc tagtgcaggc cccactccca 61 cacttgctgg ggacagtgca agcatactca gtcaaggacg ctgaaccatg cccatcggga 121 gttcaggatt ccctctgcag caagtgtgca aactccacac gcaagtacag tctacacagc 181 aagaaaagtg gccaaagact tcccatccca taattcattt cgtctatgta caaaatatct 241 cacatatcac cccagagata aaagctaata acagcaacca ctcttcctga acccccccac 301 cagtacaacc catcacatgt atttataacc aaacccattc ccaatttgtt aaacatggcg 361 tgagtcccgc ttagatgaca aaccttggtg agctacagag tccctggaca cctggcagcc 421 aggggtagaa agtgccccca tagttgccca tgcccatggc cctcgagtgt ggctcaggaa 481 gcaagctgga ccagcaacaa aaagaggtag aatctacaag gcccagctca gggtgttctt 541 ttcctatctc agtttgggga ctcagcagcc accaatgcct gtcccacatt gctgcctggc 601 ccagacattc tagaggatgt gcagtagctg ccacaagggt gcaaagaaat tgatgggacc 661 ccttctctct gcttagaccc a //