LOCUS BG071964 602 bp mRNA linear EST 12-MAY-2010 DEFINITION H3105B09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3105B09 3', mRNA sequence. ACCESSION BG071964 VERSION BG071964.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 602) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG071964.1. Other_ESTs: H3105B09-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3105 row: B column: 09 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..602 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3105B09-3" /db_xref="taxon:10090" /clone="H3105B09" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 182 a 125 c 143 g 152 t ORIGIN 1 gcttttttta cttactagca gaaaataagg aggcctttgt ctctaacagt ttaaaactct 61 gagcactaat ccaaactagg tacaaagtag tattatgtga ggaaacccta acactgagca 121 aagtgtaatc ttagtctact tcatcaagct gcacacataa acaaatagaa cagatgcaag 181 gcggccacat ggcttactta cttactttgc ttttaaactt ctctgcacat ccaaaacaat 241 ttggcaatca gaattatcag cccaataagg aacgaggagt ctgattggtt gatttctcta 301 gctttaccta attgctgtgg ggtgaagtgg ctacagaggg aaagtagggc ctaagactgg 361 caggaaagct ttcagaaaga attccagggt tggggggggg gtacttacag gtgagagtga 421 actgagcagc ccccaacaag aagcagagag catctgtgcc tgccaggtct actagcatta 481 ggcctggcat ggtggtgcac accgttaatc ccagcacttt caagacaaac gcaggcatat 541 ctctgtgggt tcaagacctg gtctacatac tgagatctag gctagctaga gttacatggt 601 ga //