LOCUS BG071921 756 bp mRNA linear EST 12-MAY-2010 DEFINITION H3104F11-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3104F11 3', mRNA sequence. ACCESSION BG071921 VERSION BG071921.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 756) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG071921.1. Other_ESTs: H3104F11-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3104 row: F column: 11 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..756 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3104F11-3" /db_xref="taxon:10090" /clone="H3104F11" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 251 a 134 c 129 g 242 t ORIGIN 1 caggacacta acactatcaa ttgaagaatc atcttaattg tacatgcaca atcaatccca 61 cgtaagttat acaaatctga agaagagctg tttacattca gttatgtctg aatcataaac 121 cttgttttaa gacatgagtt tagtgaatac agtaattatt tgaggtctca gttcactttc 181 agttctttgg aaaatgtagg ttgaacattt ttaaagaaat agtaaaaatt taaattacag 241 ttataaaatt gtagaattta gtgtgactta tggcttcatt gaactttaaa ataactttcc 301 taaaaaatta gcatgaaacc aagttagctc tatgtttatc atgagttgaa tccttccact 361 taactacact tctaaggcag atgcttcaga tggtacccaa taaagcctat cagaaaagag 421 gatgctctat tcaacaaact atagcctaat attgttaaga tatgatcggt tttcaatgct 481 gtttttgtta tcctcacacc gtttacagag agaacagagg aaatacaggg cacaaagatg 541 ttcataaagg ctgagctcat gtgttgacct tggttacttg atccaagaat tacttcagac 601 tttagatatc ttcaaatatt atactggaag acatggagag atatcgccca ccaggttgat 661 accttcctga ctcaggttcc agagattcat ccgtaaacgt ttctgcatta aaatccagag 721 gctcagcatc ctggagaagt tctattcggt ctcttt //