LOCUS BG071889 743 bp mRNA linear EST 12-MAY-2010 DEFINITION H3104C10-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3104C10 3', mRNA sequence. ACCESSION BG071889 VERSION BG071889.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 743) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG071889.1. Other_ESTs: H3104C10-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3104 row: C column: 10 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..743 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3104C10-3" /db_xref="taxon:10090" /clone="H3104C10" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 234 a 120 c 105 g 284 t ORIGIN 1 ctttctttct ttctttcttt ctttctttct ttctcttttc cttccttcct tccttctttc 61 cttcctttat tattttggta gtaggggatt tgtagtcata gttgaatact ggacatagtg 121 ttattatttt tatcacatac attccaagat atttattttg tttgtgacat aagtataaaa 181 atgacagaaa ttgtgtaaaa taaagatgtc ataaaatggt ataataacta ctgtaaacct 241 ttggccaaaa ccctaacatg accttttatg aaaataagaa aagtctattt ggtttcaaat 301 cagcataaag tgttgacagt tccagtgcct tattacaatt tgatttccta ttcaaaatat 361 aatcacaatt ctttctctag ttattcttgt ttacctttca agtcttttga aatattatgc 421 ttttgagtat ttcaacttta tggttttgta tttgtatggc attatccagt tatccggatt 481 gtaacttttt gaattccttg tcaatattgg acattagccc tctatcagat gtagggttgg 541 ttaatatctt ttcccaatct gttaaaaatt ttaggcaaat ggatggaact agaaaatatc 601 ctgttgacat aaaccaataa caaaagaaca cagatggtat gatcttactg ataagtggat 661 attagtccag aagctcaaaa tactcaaaat aaaattcaca caccacatga agttcaagaa 721 gaaggaacac caaagtatgg ata //