LOCUS BG071875 656 bp mRNA linear EST 12-MAY-2010 DEFINITION H3104B06-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3104B06 3', mRNA sequence. ACCESSION BG071875 VERSION BG071875.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 656) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG071875.1. Other_ESTs: H3104B06-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3104 row: B column: 06 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..656 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3104B06-3" /db_xref="taxon:10090" /clone="H3104B06" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 204 a 109 c 150 g 193 t ORIGIN 1 gtttttaaaa tcagaataga actttatttg tggaattgag attttgaaaa tgattttata 61 gtttatgcaa taaatttcga taccttaatc tggatataca tttaccatat aagaaaaaat 121 ttaaaaacaa tgtcaaatag cttatcatta aaaccaattg agtttaactt gatacgtata 181 aggaataact cgagcggtat aaataaaatc gaaaacaaat accatttggg tttgcttttg 241 taatgcaatt ttgtgtttca tttgttgggg tggggattag agaaaaagta ggctaaaaca 301 cttttctaga gaagtacaag gtcttcgtgt ttcgtgaatg tgactccaca atgccccagt 361 ggtagaatat gaacgagatg ttttcatgca ctagcatggg gggctgtggt gttccagcca 421 gggtcccttc ggaccattac tacacacctg gggtagggag ggggacacca ggttctgtga 481 tgtcactgaa tcatccaaag gaaaatgagt gtgaaggagg aaggaagctc gtgttttcta 541 agccctgctg gggatgagtt ctggggacga cactgaacaa ccgtgtacag ttctgttttc 601 acccttagtt ccacacaatg ggggcactcc agataacaca ccagcccata ttagtg //