LOCUS BG071843 749 bp mRNA linear EST 12-MAY-2010 DEFINITION H3103G09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3103G09 3', mRNA sequence. ACCESSION BG071843 VERSION BG071843.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 749) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG071843.1. Other_ESTs: H3103G09-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3103 row: G column: 09 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..749 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3103G09-3" /db_xref="taxon:10090" /clone="H3103G09" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 203 a 161 c 198 g 187 t ORIGIN 1 aagaatagaa tttgaatatt ttgctaaatg gcagaaaagt ggcccagaaa attcagggtt 61 agaggaatct caggaagttc cacaggagcc tagaaggtgt tgcttctcaa acattctttt 121 gactccttac taaacttaaa gccagaaatg acatttggaa atggagccga gcactgtagg 181 gaagaaggtc ggggcctgga ggtgtggtct tagtgagtgg cgggagtctc tcaggttctt 241 cactgggagc aatagtcact cttctttctt cattcagaaa ttaacttcaa tcaaaatcca 301 gaatgacaag atgcgcacgg gaaacgagct tgataagagg agtgagtgtt ggtgagctgc 361 aaccattcgt tgtcctcctt gcagatgaat ttaacagagt gatcattcca gtcaaacgag 421 gcgaagagaa cacagactat gtgaacgcat ccttcattga tgtaagtggt ggattatgtc 481 cccgtgtgtg tccacggaac ttccagtgcc tccctcacat gcctgaccca tacagggata 541 ccggcagaaa gactcctaca ttgccagcca gggccctctt ctccacacga ttgaggactt 601 ctggcgaatg atctgggagt ggaagtcctg ttctatcgta atgctgacag aaccctcaga 661 atggacagct tcaggcagca ggtgtggtaa gtgtatctgc tctgtttcag tgccggggca 721 ggacggacag gaaccttctg tgccttgag //