LOCUS BG071829 709 bp mRNA linear EST 12-MAY-2010 DEFINITION H3103F06-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3103F06 3', mRNA sequence. ACCESSION BG071829 VERSION BG071829.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 709) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG071829.1. Other_ESTs: H3103F06-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3103 row: F column: 06 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..709 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3103F06-3" /db_xref="taxon:10090" /clone="H3103F06" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 222 a 149 c 142 g 196 t ORIGIN 1 gagaacttca aacattcagt ttattaaact aaggctagag aagccatagc atgaaaaaga 61 actgcagtca ttcaggacaa agttgaggat tttataaagc caaatcaaaa gacttaagac 121 atgggaagat tcttaagtgt aaggaagtaa taaaacacag aaagtgacca caagaattac 181 aaatatattt gggtctcaga cctgggaaat ggactataca cagccttcta ggggaagaga 241 cgccttagat gttctgacag cactgcacct ttggcttgtt ctcagtggtg ggcggaacat 301 gaataggaac cacattgttg cttggagaca tgtcattttc acgtctgtct gacatttgct 361 tctgagaaac aatgcggtat atctctgtta gaattgtctg aaaagcagct tcaacatttg 421 tagaatctag agcagatgtc tcaatgaatg acaaaccatt cttctctgca aaagctcttg 481 cttcatctgt aggaactgcc ctgagatgac gtaaatcact cttattgccc acaagcatga 541 taacaatgtt actatcagca tgatctctca gttctttcag ccatcgctct acattttcat 601 atgtgagatg cttagcaatg tcataaacca ataaggcacc tactgctcca cgatagtatg 661 cagacgttat agccctgtac cgctcctgcc ctgctgtgtc ccatatctg //