LOCUS BG071822 829 bp mRNA linear EST 12-MAY-2010 DEFINITION H3103E10-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3103E10 3', mRNA sequence. ACCESSION BG071822 VERSION BG071822.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 829) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG071822.1. Other_ESTs: H3103E10-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3103 row: E column: 10 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..829 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3103E10-3" /db_xref="taxon:10090" /clone="H3103E10" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 250 a 178 c 142 g 259 t ORIGIN 1 acattgaaaa tagactgttt attaaaataa tttaaaagga caaacataga ctcgtgaaca 61 tacccctgta atgtaataat tccaagagaa gattgtttag aaaaatccat ttaattataa 121 catttcttta aatacaaaaa gcaatggcac gaatgaatcc ccatggcata accacagcac 181 ccattcctag tgctaccaaa gcacccatcc acaggctgct ctcgtcattg tatgctcaac 241 acttccctgt tctcatgaac agcactttct ttcctagagc ggcatcaaga gcttctgagg 301 acgtgtgttt ggcttcccct aaagaactat gaacagtgtc atcatatgcc agtggctcat 361 ccacacatgc catctttcgt cagtgacact ctacccttat gaaatagtga acattgctct 421 tatttcattt ctcttattta cagcagaggt ctgtgttctg tcacagtgtg gtctgtgcac 481 aaaaagccct ggggataata ctttgcacag catcttaaca aactgactca gattctttaa 541 aatacacaca ccgacaaaag cttgttcaca taaatgattg tcataccctg aagacttact 601 ctgaaaggag ggaaagtggc attttacaat gtattctcca attgttccag gttgtactat 661 tatgctgtgt ataatgttgc caagtaactt gatatgtgat ttttcagatt ctatctgaaa 721 gagtgttgta cacataaagt gatctagctt ttcccattgt ggtcatagat gactcagtta 781 gtccgtgtgg ctccatattg tttctcctga gtgtttaaac atttaatgc //