LOCUS BG071790 774 bp mRNA linear EST 12-MAY-2010 DEFINITION H3103D01-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3103D01 3', mRNA sequence. ACCESSION BG071790 VERSION BG071790.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 774) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG071790.1. Other_ESTs: H3103D01-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3103 row: D column: 01 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..774 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3103D01-3" /db_xref="taxon:10090" /clone="H3103D01" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 236 a 167 c 178 g 193 t ORIGIN 1 gaaaagaatg gctttaatca ttattaaatg tgcagtggga aggagtgtgc ttcagatagt 61 ctgggcaggg ctggcggcag gcaggtcact cctgctgcca cagctgcaga cactagtttg 121 tacatgacaa gacaatgagg gaaagcagtc cctttcaaac aaactggaaa aaaaattgtt 181 cacagtggtt tgtatcaaca gaatgcattt atgacaatta catgtagaga ctcacgcact 241 ctaaggctct ctttatatcc taaagaaaac aggcatttac attattcatg acttatacta 301 aattaaaaaa agatcaattg tacactttct cctcagacag gataacctgc cagggtgtac 361 agcttaacac catcatcaga gctgtccaca aagggaacag aggttcaaaa caaaatgctc 421 tcttgagaat gaagtgcttg gcttgctgct ataaccagca agtgccagca gtaatcaaat 481 ggaggagggc ccgacagaca ggtctacctg ggcaagctga ccagcacatc acagtttaaa 541 aaggaaggtt atgaacgcta tgtcacaagt cccaaccagg cagtgtcaag tgacatctat 601 ttctttgctt gctttgtgat cataccccgt ggtggtgtga caggtctcgt ggcgttgggc 661 ttctttttct ctgcaggctt taaaatctgg aaggaacaca tgagggtctc atccacactc 721 atcatggcgc ctgcattgtc aaactcgcca cagtagttgg gtgcagaaaa caga //