LOCUS BG071722 731 bp mRNA linear EST 12-MAY-2010 DEFINITION H3102D10-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3102D10 3', mRNA sequence. ACCESSION BG071722 VERSION BG071722.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 731) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG071722.1. Other_ESTs: H3102D10-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3102 row: D column: 10 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..731 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3102D10-3" /db_xref="taxon:10090" /clone="H3102D10" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 223 a 145 c 153 g 210 t ORIGIN 1 gaaactttta gcagatgcta catttattca ccagctcaga ggaagatctt gccttttaat 61 tgtgtatctc aaacctttag gtggttgaca tatccatgct cctttaagca agggaaattc 121 aattaagatt tcatcaatcc ccaatactaa ggaagcttcc atttctctgt tctacaatca 181 acgttacagg agtcatttta aaaaacgaca acgttgggtc tccagatcat aaacataata 241 tataccacac ttagaacatt gggttgtaac aaagttgata tccttgggct gtcgtttggc 301 cctgggtata tccaggactt caggacaaaa ttgttctatc ctgtgtgata gtattacacc 361 cctgtcatca tagcactcaa gagggccggg atacatctca tagctcagct gggtcacctt 421 ggatgtgtgc tgtagaagtt gtttcaggga cagcagagag agttcatttt cctggaaatt 481 gacatctgtg aggtgggaac attgacttag ggcaggcagc agggatttga aatgaggttc 541 ccccatatta catgacttta atgccaagca acccagggta tgtctaacac tctcaaggag 601 aaacccaaga ggctcaaggc ataaatattg taaatgtata tcaataatgt acaaacattt 661 tagctcaaaa atattcaggc aatagggcag gtaatccaag tctgattgtg agagttcaca 721 gttactgatg c //