LOCUS BG071694 657 bp mRNA linear EST 12-MAY-2010 DEFINITION H3102B04-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3102B04 3', mRNA sequence. ACCESSION BG071694 VERSION BG071694.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 657) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG071694.1. Other_ESTs: H3102B04-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3102 row: B column: 04 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..657 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3102B04-3" /db_xref="taxon:10090" /clone="H3102B04" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 194 a 154 c 124 g 185 t ORIGIN 1 aacttacctt tcttcataaa aaaacagtgt cttaccaatc ctggacccat tcaaccttct 61 agaccctgac cctgatagtg atgttgttaa cagtcaaata cccatgagag agatcatcta 121 ggtttatgag tacacaaaaa aagcatctat atatacactg tctgggcaga agccacatat 181 aaacgccaaa ctgtttttct gaccacaatc cccctgttat cagattccat cgaaatgttc 241 cccatgtcaa gctcagcctt cagggtccca gtcactgtaa atctctttat ttccaaccat 301 atgggaagtg tctgaaatca cagtttctga gcactgcaga ttaaagatgt gttccaagcc 361 tgtcatttat tcatatccag aagtcctgta tctatgttta ctgaaaacaa gaacaaagta 421 tagggtcctg gtcatagaca cagggcttac aacatttgtg acagctatct gtagcaaaag 481 agatgctctt gggctgcctt atagctctga gagtatacat gagctcctga caaagttgga 541 caaatctttc tacagagaca tgacccaact cattatagca ctgcagaggg gcagggcatt 601 gttccacatt catcttgctc cagttggctg tgtgctgtaa aagctccttc agggtgg //