LOCUS BG071638 733 bp mRNA linear EST 12-MAY-2010 DEFINITION H3101D10-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3101D10 3', mRNA sequence. ACCESSION BG071638 VERSION BG071638.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 733) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG071638.1. Other_ESTs: H3101D10-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3101 row: D column: 10 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..733 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3101D10-3" /db_xref="taxon:10090" /clone="H3101D10" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 180 a 190 c 138 g 225 t ORIGIN 1 gttataaaca ctttaatttg ttctttgaat agtgactact ttccttaaat acatctcatg 61 tccaagaatg aggacacctt aagcccttga ttaaaacaat gaaatcacac aagcacacac 121 agaagtggaa agaagctaac tttaaataag ttttcagtca cattattgct ctgaagcttt 181 cagtctggtt ctccttccaa atgcttcttc cttccttctt ttcttccttc cttcctttct 241 tccttttaat gcagatgctc tcctttggtg gctgtagatg gtagttttat attacactgc 301 caacaacagt taacacttct atttcattca tagattcttc gaggctcccg aagcatcacg 361 ccactttctg tcatggcatt ttgtaaacgt tttatcgagt ctgaggacgc ctcccacggg 421 gtgggctggt agaccatgaa gttgattcct gcttctaagc accgctgtgc cagcactcgc 481 ccaatgctct cacaagccac cacgtttctg gtactataaa ggtgtttttt aatagcccat 541 tctcgagtgg atgctgaaac aacaacctgg ccgttaagat gctcaacaaa tgcttctacg 601 tgatgctgag tctttacaac tcgcaacctg tgccagaact cacggttagg ccacacggta 661 gcccagcccc gttctttccg agctacccct aagagctcca gattccgagg gttccggttg 721 gtgaactccg ggg //