LOCUS BG071620 786 bp mRNA linear EST 12-MAY-2010 DEFINITION H3101C04-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3101C04 3', mRNA sequence. ACCESSION BG071620 VERSION BG071620.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 786) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG071620.1. Other_ESTs: H3101C04-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3101 row: C column: 04 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..786 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3101C04-3" /db_xref="taxon:10090" /clone="H3101C04" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 280 a 136 c 172 g 198 t ORIGIN 1 acttttacta aacactttgt gtttaatata ttttaaatta taaagaaatt acaaggaact 61 cctaaaaaat ttaatacaaa aatattacaa gttaggacaa ttaagcattg gtagatgaca 121 tttaaagaag catgcgggga aaggtagcat agagttaaca ttttcactgt tgacagagcc 181 ttggtacagc agagaaaagc accgcagaac caggtgtcca taatggcttt tcctctactg 241 tagttttcag gtgaatatat aggaaaaaaa aaatcaaatg aaccagtaaa ctgtaatcag 301 ctacatatta taataggtaa gaaatctaat tcatgataaa gtattagaac tatgaaataa 361 aaaatagcct ccctgcaatg gtggctcaag aaacttctgc ctagcttcag gctcatatgg 421 actcccaatt cttggcagcc caatgctttc cggaaaaaat gtaagaacag aatgtcatta 481 acaacctagg ccatgcagta aaaatgaacc ccttgaaaac taaaggttgt tagctttagc 541 agttgcagtg agggcaggac aaggctacag ctgcctgcat ctacgaagga aaaccaagaa 601 aggcagtggg cacggagaag gaacttgact aaggaaacca actacaagag ttgggggaaa 661 ctgaggctgg atgtgccttg ggatgttctt catctgttac tgggtgtgta gtaagatccg 721 aaatcagtta cgggtggaaa cactgcagca tgtttggttg gcatgggtga aagcctcagc 781 cacata //