LOCUS BG071204 683 bp mRNA linear EST 12-MAY-2010 DEFINITION H3095H09-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3095H09 3', mRNA sequence. ACCESSION BG071204 VERSION BG071204.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 683) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG071204.1. Other_ESTs: H3095H09-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3095 row: H column: 09 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..683 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3095H09-3" /db_xref="taxon:10090" /clone="H3095H09" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 190 a 140 c 142 g 211 t ORIGIN 1 cttttcaaga cagggtttct ctgtgtagcc ctggatgtcc tggaactcac tttgtagacc 61 aggctggcct cgaactcaga aattcgcctg cctctgcctc tgcctcggcc tcccgagtgc 121 tgggattaaa ggcgtgcgcc accatgccca gctttgtttt gtcttgtttt ttttgtttgt 181 ttgcttgttt tgttttattt ttaaatgaca gggtcttact atgtagtcct cctgttccag 241 gctaaccttg agcactggag agctccctga ctctgcttct gagttctggg attaaaggtg 301 tgcaccacca cacaggcctc aattttttga taacatataa caccggaaat atgaatttat 361 tgaattcctg ataagctact aggaaccctc agacacaaca aagcaggtta ttttccctgg 421 aactcacatg aatatatgac agaaacagca aaggacaaaa ataaaagcta cacagatgct 481 gcgaattaat ttcggcttta aagtttagtt tcatttagaa ccttttaagt tcctcttgga 541 tgcttttatt tcctcctgat ttggtcgggg caataaggga gtaaggtaga agagatatca 601 gaaaacaaag ttacaggaaa tgaaagcatg catgaaactt tttcagaaag gtcaggaaat 661 aataatcgaa ggatattaca tta //