LOCUS BG071117 595 bp mRNA linear EST 26-JAN-2001 DEFINITION H3094H04-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3094H04 3', mRNA sequence. ACCESSION BG071117 VERSION BG071117.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 595) AUTHORS Kargul,G.J., Dudekula,D.B., Qian,Y., Lim,M.K., Jaradat,S.A., Tanaka,T.S., Carter,M.G. and Ko,M.S.H. TITLE Verification and initial annotation of NIA mouse 15K cDNA clone set JOURNAL Unpublished COMMENT Other_ESTs: H3094H04-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3094 row: H column: 04 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..595 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3094H04-3" /db_xref="taxon:10090" /clone="H3094H04" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 125 a 176 c 160 g 134 t ORIGIN 1 atcgctgggc tgacttttat ttatttttgg attttcaaga cagagagtct ccttgtgtgg 61 ctctggctgg cctggaactc tgtagaccag ggtggccttg attgaactca agagatctgc 121 ctgcccctgc ctccaaagtg ctgggactaa gtgctgcctc ccccggcgtt gggccgactt 181 tttagcccgg ggtctccaga acgacctgaa gggtgacagg gactactttt ggaaagaaca 241 gtcctcttac attacacact ataccaccca gtcaggagaa caatatatac cgcaggtctt 301 cctggtgaac tcacactccc gctctctctc cgccgcagca ctggactcgc tttacgcccc 361 aaagactcca agtgcagggt ctgtgcaaga ccctcttgac ttagggctta attgtgagga 421 cgctcctctg cgaaatggag gaaaggaccc aggtcctcag caagcgtgcg ctccagactt 481 cagacccggt tgtcccgcgt gcacggcagg gcagcagcac ctacctcgcg cggcgggacg 541 agggaagcaa gccttactgc ggagccgtgg ctccctcact gctacggata gtcga //