LOCUS BG071097 625 bp mRNA linear EST 26-JAN-2001 DEFINITION H3094F08-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3094F08 3', mRNA sequence. ACCESSION BG071097 VERSION BG071097.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 625) AUTHORS Kargul,G.J., Dudekula,D.B., Qian,Y., Lim,M.K., Jaradat,S.A., Tanaka,T.S., Carter,M.G. and Ko,M.S.H. TITLE Verification and initial annotation of NIA mouse 15K cDNA clone set JOURNAL Unpublished COMMENT Other_ESTs: H3094F08-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3094 row: F column: 08 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..625 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3094F08-3" /db_xref="taxon:10090" /clone="H3094F08" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 195 a 158 c 124 g 148 t ORIGIN 1 cttctgcctg aaacttttat ttattataaa accgttaaaa ccccacttaa aagctggaca 61 tggcaataat aaaaatcaca gtatagttaa gaacactggt aaaaccccct ccccacctgt 121 cctggcacaa aaagatctgg aacttggcat catggtcaag ccggcttctc cacaggcaag 181 gctgttccaa ggttaacatt atggcaaagg acatctgaac aacgggtcct ggacaggcgt 241 cctcttaaat gaagtacctc cggttccacc acacagggct ttgcaggcct ctggcccagg 301 ctctggctcg atttcgcttg gtccggagat tgcaagctag cgacacaatc acaaacattg 361 caaagatcct aatccctttg gatccataaa tgtacaggac tgtttcactt aaatcaccat 421 cagatgtaat aagaacgtgc atattcaaaa agtatagcaa tagttccggc ctcaaatcaa 481 acaatccttt gtagacccag gtctctaggt acacaatcac aaactccagg gggtccagga 541 aagatggaag gtgatgttgc atctcacaaa cagggccata acatatgtga agttgagaca 601 tcatcaccct tccctggata gtcga //