LOCUS BG071077 685 bp mRNA linear EST 12-MAY-2010 DEFINITION H3094D12-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3094D12 3', mRNA sequence. ACCESSION BG071077 VERSION BG071077.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 685) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG071077.1. Other_ESTs: H3094D12-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3094 row: D column: 12 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..685 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3094D12-3" /db_xref="taxon:10090" /clone="H3094D12" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 240 a 126 c 142 g 177 t ORIGIN 1 gtaaaatgtt taaaaaaatt taatgttttc atcacaaaac ataaacatag ggttgggggg 61 tgtagctcag ttggtaaatt ggttgtccaa atgtgcttaa aaccctggca taatgtttag 121 caccacagta actgagcatg aagataggcc agaggtggca catgccttta atctaagcac 181 tcatggggga gatctctgtg ttcaaggcca gcttgatcta acttactgta gtaagttaca 241 gggatagcca gaactacatc aagaaaccct gtgtcttgaa aaacagaaca aaaaacaaca 301 acaagcacag tccacactta taataccaac acttggagaa ctggtgacag aagggtcatg 361 agttcatgat agttctcagt tatgatactg tttatgggtg ggggagggga tacaggggcc 421 aacaagatgc ctcagtgggt aaagctgttg ccacaaaagc ctaaatacct gagtacaatc 481 catgaaaagt ggaaagggag aaggaaccta taaagttgtc ctttgaactc cacaaacact 541 gtgacacatg tgttttctct ctctccataa ataataatgt tcagaagatc aagttcaagt 601 ctgaccttag ccatagaaga ctaactgccc aaacataaaa agaaacatat attaatcagt 661 ttttttaacc attctataat atgta //