LOCUS BG071073 650 bp mRNA linear EST 12-MAY-2010 DEFINITION H3094D08-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3094D08 3', mRNA sequence. ACCESSION BG071073 VERSION BG071073.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 650) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG071073.1. Other_ESTs: H3094D08-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3094 row: D column: 08 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..650 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3094D08-3" /db_xref="taxon:10090" /clone="H3094D08" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 200 a 111 c 111 g 228 t ORIGIN 1 aatattgctg gtgattttta atggttttaa gtttgtaaca ctgaacatta catacacata 61 tatttagata aagcaattag ataattggat taatgttcaa gattatcact gcaaaagaag 121 agataattat ataatttcaa aataacaatc ttaaatctta atttcaaagt agagatatga 181 gtggctcatg atcccttttg tctcaattac tgctagttat gtctagtgaa aaggcctcca 241 agcaataatt aaattagtag cagtgagttt ttctggtgtc caggacgtga aacatcactt 301 ccactgtctg gcagctgcct agaatttata ggtccttcct ctgttttcaa agctagcaag 361 caatgcaaaa ggttcaagtc tctcccagct ttaatccatt ctgccttcct cctctttaaa 421 agatgtctgt gagtactgaa ggcctatcta gatagttcag gataggtttt tttggttttt 481 gggttttttt gaggtcaact aattagcaat actaattttc ctctgccatg taaaagatac 541 agtcacaggt ttcagagttg tagatcttca ttattatgga cactattact ctacctggca 601 ctgtttccta aactctttgt acgattttag aacaaataaa ttaacgagga //