LOCUS BG071019 771 bp mRNA linear EST 12-MAY-2010 DEFINITION H3093G11-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3093G11 3', mRNA sequence. ACCESSION BG071019 VERSION BG071019.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 771) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG071019.1. Other_ESTs: H3093G11-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3093 row: G column: 11 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..771 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3093G11-3" /db_xref="taxon:10090" /clone="H3093G11" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 211 a 221 c 142 g 197 t ORIGIN 1 gacttttgac ttttgaatca ttttaaaact tttaaaataa agcaaaagct gtatgtattt 61 atttacatat acagtctttt atattccagg atagcttcca acttgccatg cagctgagga 121 taaccctcaa tggctgattc tcctgcttcc acctctaccg tgctgggaca gaggcacggt 181 ttacacagag gaagttcccc aatcctatag cccatgctct agtccactgt gtctcttacc 241 ccagaatctt ggcacagtca tcatagtact tcatcgagtt cttgacaaag ctaaagccat 301 tgacgtcaca cacaaaagag tgaccattgg cccgaagaag gtcaaatcca caaactgttt 361 gctgcaaaag cacaaaggca aggagattca gaggagctct cagatccttc tcctgtctcc 421 ttcctccatc tcacaaccct acaagcccaa ccttacctta aaagctacgc agaccttcct 481 ggccaccagc ttttccatgg cggtcaacat gactggatat cgaacctctt tcccctcact 541 gtctcgttca accttcccat ccaaagctgg agactttcta gcttcagcat gggcataatc 601 tggccccact gtgtacacct gcaggtacat agcaccactg agtatgccca cagctcaccc 661 tgtatatgag aagacagtat gagcactagg tctgtagact agtccagaat caaaaacgaa 721 actctgctca gccacgagtg gtggcccccg cctgtaatcc cagctcaggt g //