LOCUS BG071003 667 bp mRNA linear EST 12-MAY-2010 DEFINITION H3093F06-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3093F06 3', mRNA sequence. ACCESSION BG071003 VERSION BG071003.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 667) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG071003.1. Other_ESTs: H3093F06-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3093 row: F column: 06 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..667 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3093F06-3" /db_xref="taxon:10090" /clone="H3093F06" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 224 a 123 c 116 g 204 t ORIGIN 1 attataaaag tgtgctttat tataaggaaa atttaaatat aaccaacaat actgaacaga 61 acagagctgg cattcatagc cgaggcattc atttcctgtt ccgtgaacgc caacgttcag 121 cctctgcaat gcaacctggg aaactgagga aagaagacag ggggagccag gaatctgagt 181 ggcttttttt cttgtttatc tgttttggga attgttcctc ctttaacaca gagcttctga 241 actctgaaat agaaaacatg tgaccttcat gtagagagtg ctccttttcc tacagaaaga 301 ttttgcaaaa ctatatttca aaacacagct aaaggtatag tgagcagtat aacatacttc 361 ttgtttatac attatccatt taacattcta gccacgattt catgtacaaa gaggactatg 421 aacattctct tataagatca tgtcagccat agatgaattt aacatacata gatacctctg 481 ttccttacaa acatgtttcc caaagtgaaa ttacccattt aaacgtgaat aactggcgag 541 agttaatgtc tctaaacatt tggtcatggg gcctgaaaat cgtaaaagta tattgctttt 601 acaattggtt gtatataaca attcatcata tttgccataa aaataagcat ctgttgacca 661 aaggaac //