LOCUS BG070931 641 bp mRNA linear EST 12-MAY-2010 DEFINITION H3091H03-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3091H03 3', mRNA sequence. ACCESSION BG070931 VERSION BG070931.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 641) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG070931.1. Other_ESTs: H3091H03-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3091 row: H column: 03 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..641 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3091H03-3" /db_xref="taxon:10090" /clone="H3091H03" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 159 a 120 c 103 g 259 t ORIGIN 1 ctttctttct ttctttcttt ctttctttct ttctttcttt ctttctttct ttctttcttt 61 ttttccttgg tttttcgaga cagggtttct ctgtgtagcc ctggctgtcc tggaactcac 121 tttgtagacc aggctggcct cgaactcaga aatccacctg cctctgactc ccgagtgctg 181 ggattaaagg cgtgtatggt tttctttaaa gtccaagaga accctgttta aaatctgtca 241 gaccatttct ttctcactcg tatctgcctg tgtggcattt gtttgcctgt atattcttga 301 gtgagggagt attcatgtct ctcataataa ccttcaatca gtggtctttc tgctttatac 361 tgcaggtgag gacaaccatg cctagcttat tatgtggggt gtagttttac tttattcatt 421 attattatta ttattttgca agaaagatct aaatacacta tagatgctat actaccagga 481 tacattattt tatcctatcc tttcaatgtt acatatattg caaaaacagt tttcaagata 541 agaataatat ttacttaatg aaaggaaaat atcacattaa aagttgatta cgttatttct 601 ttttaaaata gagttttggc caagtaagtt taaaacaatt t //