LOCUS BG070888 780 bp mRNA linear EST 12-MAY-2010 DEFINITION H3091D08-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3091D08 3', mRNA sequence. ACCESSION BG070888 VERSION BG070888.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 780) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG070888.1. Other_ESTs: H3091D08-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3091 row: D column: 08 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..780 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3091D08-3" /db_xref="taxon:10090" /clone="H3091D08" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 259 a 161 c 164 g 196 t ORIGIN 1 aaattatttg aacagaacga tcagccacga gctctaagaa gcacatcatc gttggtgttc 61 agggtagaac agtgtattct tagtatccag aaaggcacag cgcgcacagt tcaaacaaca 121 cattggagat tgccaccaga gctttggcaa ggtttacatg acatctgtta acaagttctg 181 ctttagccat tccataagct gtaaggcctg gccatacgca ttaggacata cacacatgca 241 gtatctaaag ttggttttat cagattgtgg caaaaatcaa tgtttgaata atattaattt 301 ggattagaaa gttgacatgg aaagaactgc tttttaaaga aatctttggt ttgggatata 361 gctcggtcgg cagaacattt gcctaacatg cacaacgccc gggacccatc ccaagcatca 421 tataactgat cctgtgacac atccatccaa gcattactaa cctgtaaata tcaatgtgca 481 atcacactct tggagacctc ttaatgctag gagttggcaa cagtgtgaga actgccttaa 541 ataggttgtg tatatgaata caagagaacc gaaagcccag tgtcatcatc cttggccaca 601 tagcatgtct gagaccagaa aagaatatgt gaggctctgt ctcagaaaag aagaaaatct 661 tagctaagca tggaacagcc aggcaggagg accaagggcc atgctcaatt acacagcaaa 721 tttgagttgg aagccagcct gggctactta agaccctgtt tttaaaatta aaaaacaaac //