LOCUS BG070882 640 bp mRNA linear EST 12-MAY-2010 DEFINITION H3091D02-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3091D02 3', mRNA sequence. ACCESSION BG070882 VERSION BG070882.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 640) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG070882.1. Other_ESTs: H3091D02-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3091 row: D column: 02 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..640 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3091D02-3" /db_xref="taxon:10090" /clone="H3091D02" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 272 a 102 c 96 g 170 t ORIGIN 1 aataattaaa ccatgaagtt tattatataa agattaaaat agtatcttga acaaaaagca 61 tttagacatt ctgccagact tttttttttt aaagaaaact gacagccaac aaatacacag 121 agaagtcagt acacctctaa gaagttactg gaaatcatca tgagatatgc cttatacctg 181 cttcaatgac aattattaaa acaaccgagt caagcaaggt aatgcatgct ttaatgacag 241 aacctgggag gcaggagcac tgtgaatctg aagtcaggaa ggactacatt agtaaactgg 301 tatctcaaaa ccaaaaaatt atgacaagtg gcaatgaagg tttgcaagaa tgtgtagaat 361 aaagaatact gatatgatac tataagaaat gtatattaag ccattaatat aaatagtatt 421 gaaattcctc aaaatactaa aaacagaatt accatgattc accaacccca ctctagagaa 481 ataaatctgt attttcttta cttcaaagag attgtactct tcaaacaaag catccacaga 541 gggacgaatt gataaaaaaa atggacatac tctacttaac ctttaaaaat acagaaacta 601 tcatgagaac atggaaacag aaacataata tttaataata //