LOCUS BG070868 733 bp mRNA linear EST 12-MAY-2010 DEFINITION H3093B03-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3093B03 3', mRNA sequence. ACCESSION BG070868 VERSION BG070868.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 733) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG070868.1. Other_ESTs: H3093B03-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3093 row: B column: 03 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..733 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3093B03-3" /db_xref="taxon:10090" /clone="H3093B03" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 245 a 125 c 124 g 239 t ORIGIN 1 aagtggcagg tgatatttaa tcattttctg tctgactaga tacctaattt aaaataacca 61 tggtttacca accagccatt caatgaataa caatgtgttt catgaaacta taagttgtta 121 atcatacaac ttcatcacaa gagttctgat tgatatttcc ataatagtca tatcttccta 181 ttttatcaga caagaaaata ctatggttga gaattttaat aaaatatttt ttacagattt 241 actagtgata attttaaact ggcttttaac ttcatacagt gcataagagt aagaaattat 301 gtgacaccca caatagttgg tgttgtgctt aggagtcaaa aattgcatca agtgtttctt 361 ctctgggtag ttcttcaata cagttttagc ttccactgtg ttcctagcct tagcaagcct 421 ctcacagaag catatctgtg tctcaaaacg gacatttttt ttcattgtta caatttaata 481 gaacaaagat agcctaagat gtggcaaatc ttgagatctt ttttatacca ttagaatatt 541 atagaaaaac tgtaagataa taagcacaaa gaacacattt tgattaaaac tactccacac 601 gtttagtgcc actggactcg aatatcagca cttggaggga aagtctggag atcaggaagt 661 gagctacagg gtgaactcaa ggccagctgg tatacacgaa gcctcctctt aaatttccat 721 aaatgtgtgg agt //