LOCUS BG070847 663 bp mRNA linear EST 12-MAY-2010 DEFINITION H3092H02-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3092H02 3', mRNA sequence. ACCESSION BG070847 VERSION BG070847.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 663) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG070847.1. Other_ESTs: H3092H02-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3092 row: H column: 02 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..663 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3092H02-3" /db_xref="taxon:10090" /clone="H3092H02" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 267 a 81 c 92 g 223 t ORIGIN 1 atcttttgat atttttattt atacttaatc caacatctct ggaagactaa gcaattcaga 61 ggtaaaaata ttggaaatgt tgcaaaatgt acataaagat aattgtttcc ttgagagaac 121 aaataaaaaa tgattcatga atatatgagg gataatgtac tataaatttt aaaatgtaaa 181 tttcaactta actatacaaa catatgaaga gaaacacatt taacctgatt tatacattat 241 actttgtaaa tatttataaa aatatttagt tacctattta atatgcacaa attttaaaac 301 atgtgaacta aaataaagaa aatgaatatt tagacacaaa aataaaactt caaaggttta 361 taactattct aaagttaata ttcatgagaa cagcttggcg tatttacaag caaaatggtg 421 agaagttaac attaaatatg tttaagagtc aactaatcaa cttaattaaa ggaatgtggt 481 actggagaat gtattacaga caaatcagtt acggccataa aataggattt atctatatct 541 aagtctttgt gtttttactt actctgaata tcagaggtga tatttaccgt ttgccacagc 601 aaagattaag agaccttcct aaaatgtata tgcagtgctt cactttgtaa gacctgtttt 661 ata //