LOCUS BG070817 675 bp mRNA linear EST 12-MAY-2010 DEFINITION H3092E01-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3092E01 3', mRNA sequence. ACCESSION BG070817 VERSION BG070817.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 675) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG070817.1. Other_ESTs: H3092E01-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3092 row: E column: 01 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..675 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3092E01-3" /db_xref="taxon:10090" /clone="H3092E01" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 244 a 111 c 81 g 239 t ORIGIN 1 accttttatt ttttaactta gttttacaat aaacagaaaa gctgatcatt aaaaaaatac 61 catagctgtc gatttctaaa atgaggttca tgttttaatg cattaccact atatcctgta 121 attacatcct ttatatacag gaaatgtgtg caaagtgctt tcaaactata aagtaattct 181 gatatataag atacaaatgg ttgcccttag gagttagtta cacttgacta cttgcaatca 241 atcacactgg ttatatcttt gatttgcatt ctatttatat aagaaaaaag ccatcacttt 301 atcataccaa cctcttttgt aatttaaaac aaaaaaatgt cacaggtcta aagttttcta 361 taataattca gttatttgct ttttcttctt ccttttaaaa tgtagaagat agatttgagg 421 ttttttaatc ataagcaaaa gccagtagat cattttaggc atatcaacca agttgtgata 481 cacaagttta aaataaagtt acagttttga aaaatttgta aagtctagga caaagaaatt 541 atgttcttat actctttttc ccaaagaaca accctatatt ccgaagatgg attcttttct 601 tcttactcaa aatattcaac acgtaatgct aacgccccca acatcataca aatcaagaac 661 aaattaaaat gtttt //