LOCUS BG070775 759 bp mRNA linear EST 12-MAY-2010 DEFINITION H3091A06-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3091A06 3', mRNA sequence. ACCESSION BG070775 VERSION BG070775.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 759) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG070775.1. Other_ESTs: H3091A06-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3091 row: A column: 06 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..759 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3091A06-3" /db_xref="taxon:10090" /clone="H3091A06" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 169 a 167 c 166 g 257 t ORIGIN 1 ctctgtattt aatttttaat cagccagaat actctgtaat ctacaaagta ttattgtttt 61 ctattttgaa tttatttttg gtaaaaggat tttttttgca tctatagatt acaaagatag 121 gcacataaac actgtcagat caatgaatcc tttgtggcta tttctgttaa gccgatcagg 181 tgagaagaat ctgggattca tagtagaagc tctttcacat ggtgtggttc cttgccgctc 241 ctcttagctg tcagctaccc catggatgtt gtccatgtgc actttgaggt agtcatttct 301 tgtaaacttc ttatggcaga aatggcactc tgccatcgga cggttaggat tgtgtgtcat 361 cttgtgtcga ataagcattt tcttcaggct aaaagccaag tcacatacgt cacactgaaa 421 aggcttttct cctgtgtgtg tcctcttgtg ttcatcgagg ccccgcttct ggctgaaggc 481 ttgctgcact ctgagcactg gtagggcttc tccctggtgt gagtacgaat gtgcatcttc 541 agtccgtcat ttttactgaa acctttttca cagtacgggc attgataggg gcgctcacct 601 gtgtggctcc ggatgtgaac tctcagggtc ccactgctgg caaatttctg gccacaatat 661 gggcagactt tctccttttc tcctgtgtgt gtcttcttat gactcctaag cactgaaggt 721 gtgacaaagg ccttattgca cagctcacat cggtacttc //