LOCUS BG070553 732 bp mRNA linear EST 12-MAY-2010 DEFINITION H3088F02-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3088F02 3', mRNA sequence. ACCESSION BG070553 VERSION BG070553.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 732) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG070553.1. Other_ESTs: H3088F02-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3088 row: F column: 02 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..732 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3088F02-3" /db_xref="taxon:10090" /clone="H3088F02" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 223 a 166 c 112 g 231 t ORIGIN 1 cccgtgtgag atgtagtggt ttattgatga cattctacaa caaatgggta gagaatgaga 61 acaagtacac attagtttac tgttccgtca ttatacatgg aaattccatc aatgcctact 121 cgttgaggaa ctatttctct gtactcttta gtttcaaata tcacatccgt ggctatcttc 181 acactcccca tcataagaaa aagtaattct ctactcacta tccatggttt ttcaaaacct 241 gcttgcatta aagaatatag accatttctt ctatggtttc ctgataccat ttatttggag 301 ccattcagat cctctacatc acagtactaa gcatgaatac tgactagtga ctcccaaggc 361 tgccactaca tttcattgag gatgactact aacaaaggat tatttaaagt acacaggaaa 421 ataaaaatgc cattgcattt cctggccgtg ctaagtttag caactagaac tgtacactta 481 aacagatatt tcaaccataa ctactcttga acccctgggc tgttatttat gtattcccaa 541 atgccatcct tcatcctggg cttcacccct gccttcctta gagtacctaa ggtgtactta 601 aggacagtcc cattcccata acaaatacct gtccctttgt tttcttagcc caagttcaga 661 aaatttattt tgctaaaaca atttgatatc ttaagcatta ctgagccaac gggacatcag 721 aataaaagtt gt //