LOCUS BG070475 700 bp mRNA linear EST 12-MAY-2010 DEFINITION H3087G04-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3087G04 3', mRNA sequence. ACCESSION BG070475 VERSION BG070475.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 700) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG070475.1. Other_ESTs: H3087G04-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3087 row: G column: 04 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..700 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3087G04-3" /db_xref="taxon:10090" /clone="H3087G04" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 189 a 163 c 144 g 204 t ORIGIN 1 cttagtgtcc atgatgagtt tatttcacgg ggaaatcccc tcccctgaac cccggtgatt 61 tcccccagac accacagtga ctggcactct gcatttttct ctttcatcac agcacacgta 121 aaaaggaaac gacaaaaaca cagtaaaaac accccttaaa ttagatttaa aagtaaatct 181 tgaagcagtg ttttgttatg ctttgattag aactatttac agatcaaagt gcacttgtat 241 ggagatagca acatttctat tacggtatag gtgacttttg ctttattgtg gtcttttatc 301 tggatataga atttttaagc ttccttcggc aacagtcatt cttctgtgac acgtaagtca 361 tggatccact gaatttctgg accagttgtt tttctctctg tgcttttctg ctgtgtgctg 421 ttacccaggt ggcccatgcc tctggagcag gcacagcctg atgctgcaca cacccgagct 481 gagtcaggac gagggggagc ggatgcaatg acgtagcgcg aggctaatcc tttggttcat 541 cttgtcgaag aaatcacttg atgaaactta caaatcactg ataaattcat cgttctggtt 601 aacaaacaag ccagcagatt accgattaaa atgtgcgaca ccgatttaac aagaccacac 661 ccaggcgccc atcttgctgc tcaaggatgc cactgtttgc //